Mini Pumpkin Whoopie Pies
Mini pumpkin whoopie pies are everything you love about fall baking in one little two-bite treat. Soft, lightly spiced pumpkin cookies sandwiched around a fluffy cream cheese filling – what’s not to love? They are a classic for good reason and making them mini makes them even better for sharing. Not to mention they make my little cottage kitchen smell heavenly!!
Have I mentioned that autumn is my favourite season?! I love getting back into the kitchen and baking some delicious treats with autumns harvest. Pumpkin comes to mind first and foremost. This is a recipe I make every single fall because it is one of those recipes that never lets me down. The cookies bake up soft and cakey, the filling whips up in minutes, and putting them together is a little bit like assembling a fun puzzle. If you are planning a full autumn baking day, my pumpkin scones are another easy recipe worth adding to your list.
What you’ll love about this recipe:
- soft and cakey pumpkin cookies with just the right amount of spice
- the cream cheese filling is light, fluffy, and perfectly sweet
- Two-bite mini size so they are easy to share and great for cookie trays or holiday gifting
- beginner-friendly – just mixing, dropping and baking
- freezer friendly – make a big batch and enjoy them all season long
Ingredients You Will Need
Pumpkin puree – be sure to use pure pumpkin puree and not pumpkin pie filling, which contains sugar and spices and will throw off the balance of the recipe entirely.
Cream cheese – softened cream cheese is key to a smooth, lump-free filling. Pull it out of the fridge at least 30 minutes before you start.
Butter – you will need butter softened to room temperature for both the cookies and the filling. Room temperature butter blends more evenly and gives the cookies a better texture.
Pumpkin pie spice – a little goes a long way here. Combined with the cinnamon in the recipe, it gives these cookies a cozy, warmly spiced flavour without being overpowering.
Powdered sugar – the key ingredient for the cream cheese filling that makes it light and fluffy. Add it gradually for the smoothest result.
Leaveners – both baking soda and baking powder work together to give the cookies a nice soft rise and ensure a soft, fluffy cookie
OTHER INGREDIENTS – granulated sugar, cinnamon, large eggs (room temperature), vanilla extract and salt
Let’s Make Mini Pumpkin Whoopie Pies
Be sure to check out the full recipe and ingredient list below
Make the Cookies



- Preheat oven to 350 degrees Fahrenheit. Line cookie sheets with parchment or silicone baking mat
- Whisk together flour, baking powder and soda, cinnamon, pumpkin pie spice and salt, set aside
- In the bowl of electric mixer, beat butter and sugar until light and fluffy. Add eggs, one at a time, mixing well after each addition, add vanilla and pumpkin pie filling and beat until well blended.





- scoop batter using a 1 tablespoon cookie scoop or heaping tablespoons and drop onto parchment lined baking sheets.
- bake at 350 degrees Fahrenheit for 10-12 minutes, just until set and cookies spring back when lightly pressed.
Make the Cream Cheese Filling
- Add cream cheese, butter, vanilla and sugar in a bowl of electric mixer (or large mixing bowl with hand mixer) and beat until well combined and fluffy.
- Add powdered sugar, 1/2 cup at a time, mixing on low between each addition, the increase speed to medium-high and beat until light and fluffy.


assemble
- match cookies into pairs of the same size and shape
- pipe or spread about a tablespoon of cream cheese filling into the middle of flat side of a cookie
- top with second cookie, flat side down, pressing lightly together
Tips From The Red Cottage Kitchen
DO NOT OVER MIX – Once the flour is added, mix just until combined. Over mixing will make the cookies tough and dense instead of soft and cakey.
USE A COOKIE SCOOP – A 1 tablespoon cookie scoop is perfect here. It keeps all the cookies the same size which means they bake evenly and match up nicely when you sandwich them together.
COOL COMPLETELY BEFORE FILLING – The cookies need to be completely cool before filling. If the cookies are even slightly warm the cream cheese filling will melt and slide right out. So be patient and let them cool fully on the wire rack before assembling.
SOFT BUTTER AND CREAM CHEESE – Both the cookies and the filling benefit from truly softened butter and cream cheese. If either is too cold the mixture will be lumpy instead of smooth and fluffy.
ROOM TEMPERATURE EGGS – Room temperature ingredients ensure a smooth batter. They also help to give the cookies a nice rise as they whip up to a higher volume that results in a fluffier cookie.
PIPE THE FILLING – You can certainly spread the filling with a spoon or small spatula, but piping it with a large round tip keeps things neat and allows better control. A zip-top bag with the corner snipped off works just as well.

Variations and Substitutions
I think the recipe is perfect as it is, but these are a few ways to make this recipe your own:
- swap the cream cheese filling for a simple vanilla buttercream with a pinch of cinnamon if cream cheese is not your thing
- For extra warmth add a pinch of nutmeg or ginger to the cookie dough
- roll the edges of the assembled whoopie pies in finely chopped pecans for a fun finishing touch
- make them full size by using a 2 tablespoon scoop instead of 1 tablespoon – adjust baking time by a few minutes
The lemon shortbread snowballs on the blog are another great option for rolling in something fun – the idea works beautifully for a cookie tray with variety.

Yes! Bake the cookies a day ahead and store them in an airtight container. When ready to serve whip up the filling and assemble. Assembled cookies can be stored in an air tight container in the refrigerator for up to 3 days.
Pop it in the refrigerator for about 20-30 minutes to allow it to firm up a bit before piping or spreading onto cookies.
Storing and Freezing
Assembled whoopie pies should be stored in a single layer in an airtight container in the refrigerator because of the cream cheese filling. They will keep well for up to 3 days. For longer storage, freeze them as described above. They thaw beautifully at room temperature in about 30 minutes.
If you plan to travel with these or give them as a gift, layer them in a container with pieces of parchment paper between each layer to keep them from sticking together.
My chocolate caramel peanut butter thumbprint cookies store and travel just as well – both make a wonderful addition to a pretty cookie tin for gift giving!

Mini Pumpkin Whoopie Pies
Equipment
- 1 stand mixer or hand mixer and mixing bowl
- measuring cups
- 1 medium mixing bowl
Ingredients
Ingredients for Cookies
- 2 cups all purpose flour spooned in and levelled
- 1 teaspoon baking powder
- 1 teaspoon baking soda
- 1 teaspoon cinnamon
- ½ teaspoon pumpkin pie spice
- ½ teaspoon salt
- ½ cup butter, softened
- 1 ¼ cup granulated sugar
- 2 large eggs
- 1 cup pure pumpkin puree not pumpkin pie filling
- 1 teaspoon pure vanilla extract
Ingredients for Cream Cheese Filling
- 4 ounces cream cheese, softened
- 6 tablespoons butter, softened
- ½ teaspoon pure vanilla extract
- 1 tablespoon granulated sugar or brown sugar
- ¼ teaspoon cinnamon
Instructions
- Preheat oven to 350℉ and line cookie sheets with parchment paper or silicone baking mat.
To Make Cookies
- In a medium mixing bowl whisk together flour, baking powder, baking soda, cinnamon, pumpkin pie spice and salt; set aside.
- In the bowl of electric mixer beat butter and sugar on medium speed until well blended, about 2 minutes. Add eggs, one at a time, beating well to incorporate between each addition. Add pumpkin and vanilla extract, beat until well blended.
- Add flour mixture and beat on low just until combined. Do not over mix.
- Using a 1 tablespoon scoop, or heaping teaspoons, drop batter onto prepared baking sheets, leaving room for expansion between each cookie. Bake in 350℉ oven for 10-12 minutes, just until bottom is set and cookie springs back when gently pressed. Allow to cool a few minutes on baking sheet then transfer to cooling rack to cool completely.
- You will need 72 cookies to make the final 36 whoopie pies.
To Make Cream Cheese Filling
- Beat cream cheese, 6 tablespoons butter, ½ teaspoon vanilla extract, 1 tablespoon sugar and ¼ teaspoon cinnamon until light and fluffy. Add 1 ½ cups powdered sugar a half cup at a time, beating on low between each addition, then increase speed to medium high and beat until light and fluffy.









This looks awesome!!! We would love it if you would link up at our linky party:
http://www.lifewiththecrustcutoff.com/two-girls-and-a-party-linky-party-30/
Live every Wednesday to Sunday.
Hosted by:
http://www.lifewiththecrustcutoff.com/ Parrish @ Life with the Crust Cut Off
http://thissillygirlslife.com/ Dana @ This Silly Girl’s Life
We hope to see you there!
Thank you! I will head on over and link up 🙂
Mmmmmmmmmm this looks so good! Great fall treat for those sweet days. This also looks pretty easy – whoopie pies always intimidate me…
Thank you Scarlett! These are super easy. I would love to know how they turn out for you!
With fall on the way these will be awesome treats for fall, they look delicious. Thank you so much for sharing with Full Plate Thursday and have a good week!
Miz Helen
I would eat the whole plate. Better have a party to take these to! Thanks for sharing at What’d You Do This Weekend.
Yummy! these look so good. I’m ready for fall! Thanks for sharing at Foodtastic Friday!
Thanks Becky! Happy to share!!
Congratulations!
Your recipe is featured on Full Plate Thursday this week. Enjoy your Labor Day Weekend and your new Red Plate.
Come Back Soon!
Miz Helen
Why thank you Miz Helen! Full Plate Thursday is one of my favorite stops 🙂
I will have to look up The Wicked Whoopie next summer on my way through Freeport!! Great outlet shopping to boot 🙂